Scopus
YÖKSİS Eşleşti
Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses
Journal of Systematics and Evolution · Ocak 2023
YÖKSİS Kayıtları
Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses
Wiley · 2023 SCI-Expanded
PROFESÖR EMİNE ARSLAN →
Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses
Journal of Systematics and Evolution · 2023 SCI-Expanded
PROFESÖR KUDDİSİ ERTUĞRUL →
Makale Bilgileri
DergiJournal of Systematics and Evolution
Yayın TarihiOcak 2023
Cilt / Sayfa61 · 22-41
Scopus ID2-s2.0-85138727339
Özet
The liquorice tribe Glycyrrhizeae is a leguminous herbaceous group of plants comprised of the genera Glycyrrhiza and Glycyrrhizopsis. Some Glycyrrhiza taxa contain glycyrrhizin, a pharmacologically significant sweet substance that also has applications in crafting industrial materials. Here, we utilized an expanded taxon sampling of Glycyrrhizeae to reconstruct the phylogenetic relationships in the tribe based on genome skimming data, including whole chloroplast genomes, nuclear ribosomal DNA, and low-copy nuclear DNA. We also launched machine learning analysis (MLA) for one species pair with controversial taxonomic boundary. The integrated results indicated Glycyrrhizopsis should be split from Glycyrrhiza, while the former genus Meristotropis should be treated as part of Glycyrrhiza. Glycyrrhizopsis includes two species, Glycyrrhizopsis asymmetrica and Glycyrrhizopsis flavescens, and we recognize 13 species in Glycyrrhiza: Glycyrrhiza acanthocarpa, Glycyrrhiza astragalina, Glycyrrhiza bucharica, Glycyrrhiza echinata, Glycyrrhiza foetida, Glycyrrhiza glabra, Glycyrrhiza gontscharovii, Glycyrrhiza lepidota, Glycyrrhiza macedonica, Glycyrrhiza pallidiflora, Glycyrrhiza squamulosa, Glycyrrhiza triphylla, and Glycyrrhiza yunnanensis. We propose a broader G. glabra that includes former Glycyrrhiza aspera, G. glabra s.s., Glycyrrhiza inflata, and Glycyrrhiza uralensis, and represents the glycyrrhizin-contained medicinal group. Our ancestral state inferences show the ancestor of Glycyrrhiza lacked glycyrrhizin, and the presence of glycyrrhizin evolved twice within Glycyrrhiza during the last one million years. Our integrative phylogenomics-MLA study not only provides new insights into long-standing taxonomic controversies of Glycyrrhizeae, but also represents a useful approach for future taxonomic studies on other plant taxa.
Yazarlar (12)
1
Lei Duan
ORCID: 0000-0001-6152-5458
2
Li Na Han
3
Bin Bin Liu
ORCID: 0000-0002-0297-7531
4
Artem Leostrin
ORCID: 0000-0002-9269-7954
5
A. J. Harris
6
Lin Wang
7
Emine Arslan
8
Kuddisi Ertuğrul
9
Mikhail Knyazev
10
Elena Hantemirova
11
Jun Wen
12
Hong Feng Chen
Anahtar Kelimeler
character evolution
Glycyrrhiza
machine learning analysis
medicinal group
phylogenomics
species delimitation
Kurumlar
Guangdong Eco-Engineering Polytechnic
Guangzhou China
Institute of Botany, Chinese Academy of Sciences
Beijing China
Institute of Plant and Animal Ecology
Yekaterinburg Russian Federation
Komarov Botanical Institute, Russian Academy of Sciences
Saint Petersburg Russian Federation
Selçuk Üniversitesi
Selçuklu Turkey
Smithsonian National Museum of Natural History
Washington, D.C. United States
South China Agricultural University
Guangzhou China
South China Botanical Garden
Guangzhou China
Metrikler
8
Atıf
12
Yazar
6
Anahtar Kelime