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microRNA expression patterns associated with average daily weight gain in Kangal Akkaraman Lambs
Eurasian Journal of Veterinary Sciences 2022 Cilt 38 Sayı 4
Scopus Eşleşmesi Bulundu
38
Cilt
232-241
Sayfa
🔓
Açık Erişim
Scopus Yazarları: Gonca Sönmez, Şeref Inal
Özet
Aim: This study aimed to identify miRNAs expressed in Kangal Akkaraman lambs and to identify miRNAs that may be associated with average daily weight gain (ADWG). Materials and Methods: According to their ADWG, lambs were separated into two groups: those with ADWGs between 270-412 g (mean:323 g) were considered to have high daily gain (HDG) and those with ADWGs below 200 g (mean:125 g) were considered to have low daily gain (LDG). Blood samples were taken, and white blood cells were processed for RNA extraction. Illumina Novaseq was used to prepare and sequence miRNA libraries (LDG and HDG groups). Readings were mapped. Additionally, using DESeq R package (1.8.3), differential expression analysis of two groups was carried out. Based on the RNA-seq data, the two miRNAs with the highest fold increase were selected and their expression levels were tested by quantitative Real-time PCR (RT-qPCR) Results: There were identified to be 129 known miRNAs, 134 new miRNAs were predicted, 40 significant differentially expressed miRNAs, of which 12 were up-regulated and 28 down-regulated, were identified (LDG vs HDG). According to RNA-seq results, the two miRNAs with the highest fold change were detected; 0,66 (oar-miR-21) and 0,61 (oar-miR-150). It was determined by RT-qPCR that HDG sheep had 0,63 times lower oar-mir-150 expression, which was not statistically significant, compared to LDG sheep. However, oarmir-21 was found to be statistically significantly less expressed 0,40 times in the HDG group (p < 0,05). Conclusion: It is thought that the obtained data can contribute to ADWG breeding studies in Kangal Akkaraman sheep.
Anahtar Kelimeler (Scopus)
Average daily gain expression Kangal Akkaraman miRNA RNA-seq

Anahtar Kelimeler

Average daily gain expression Kangal Akkaraman miRNA RNA-seq

Makale Bilgileri

Dergi Eurasian Journal of Veterinary Sciences
ISSN 2146-1953
Yıl 2022 / 12. ay
Cilt / Sayı 38 / 4
Sayfalar 232 – 241
Makale Türü Özgün Makale
Hakemlik Hakemli
Endeks Google Scholar, CABI, EBSCO
TEŞV Puanı 48,00
Yayın Dili İngilizce
Kapsam Uluslararası
Toplam Yazar 2 kişi
Erişim Türü Elektronik
Erişim Linki Makaleye Git
Alan Sağlık Bilimleri Temel Alanı Zootekni, Genetik ve Biyoistatistik

YÖKSİS Yazar Kaydı

Yazar Adı SÖNMEZ GONCA, İNAL ŞEREF
YÖKSİS ID 6697010