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SCI-Expanded JCR Q3 Özgün Makale Scopus
Synthesis, molecular modeling, quantum mechanical calculations and ADME estimation studies of benzimidazole-oxadiazole derivatives as potent antifungal agents
Journal of Molecular Structure 2022 Cilt 1252 Sayı 132095
Scopus Eşleşmesi Bulundu
30
Atıf
1252
Cilt
Scopus Yazarları: Ulviye Acar Çevik, Ismail Celik, Ayşen Işık, Renjith Raveendran Pillai, Trina Ekawati Tallei, Rohitash Yadav, Yusuf Özkay, Zafer Asım Kaplancıklı
Özet
In this study, a series of new 3-((5-(4-(5-substitue-1H-benz[d]imidazol-2-yl)phenyl)-1,3,4-oxadiazol-2-yl)thio)-1-phenyl propane-1-on (4a-4d) derivatives has been designed and synthesized as probable antifungal agents. The final compounds were screened for antifungal activity against Candida glabrata (ATCC 90030), Candida krusei (ATCC 6258), Candida parapsilosis (ATCC 22019) and Candida albicans (ATCC 24433) by employing the broth micro-dilution method. All the new compounds’ structures were elucidated by 1H NMR, 13C NMR, and MS spectral data analysis results. The results demonstrated that compounds 4a (MIC50=0,78 µg/mL) and 4b (MIC50=0,78 µg/mL) possessed better inhibitory activity against C. albicans than ketoconazole (MIC50=1,56 µg/mL). Molecular docking studies of compounds were performed at the active site of 14-alpha demethylase and estimated ADME profiles were calculated. Furthermore, 100 ns simulations were carried out of CYP51-4a, CYP51-4b, CYP51-4c, & CYP51-4d, protein-ligand complexes which revealed mean RMSD values are 0.22, 0.28, 0.26, and 0.23 nm, respectively. The simulation result shows lead compounds bound tightly within the cavity of the CYP51 target protein and thus having conformational stability. The simulation and MM/PBSA results reveal that all ligand-protein complexes are stable and have stable interactions till 100 ns simulation time. Thus, these synthesized lead compounds can be further analyzed for in vitro, in vivo experimental validation as antifungal candidates.
Anahtar Kelimeler (Scopus)
Molecular docking Molecular dynamics Benzimidazole DFT

Anahtar Kelimeler

Molecular docking Molecular dynamics Benzimidazole DFT

Makale Bilgileri

Dergi Journal of Molecular Structure
ISSN 0022-2860
Yıl 2022 / 3. ay
Cilt / Sayı 1252 / 132095
Makale Türü Özgün Makale
Hakemlik Hakemli
Endeks SCI-Expanded
JCR Quartile Q3
TEŞV Puanı 1125,00
Yayın Dili İngilizce
Kapsam Uluslararası
Toplam Yazar 8 kişi
Erişim Türü Elektronik
Erişim Linki Makaleye Git
Alan Fen Bilimleri ve Matematik Temel Alanı Kimya

YÖKSİS Yazar Kaydı

Yazar Adı ACAR ÇEVİK ULVİYE, ÇELİK İSMAİL, IŞIK AYŞEN, PILLAI RENJITH RAVEENDRAN, TALLEI TRINA EKAWATI, YADAV ROHITASH, ÖZKAY YUSUF, KAPLANCIKLI ZAFER ASIM
YÖKSİS ID 6106847

Metrikler

Scopus Atıf 30
JCR Quartile Q3
TEŞV Puanı 1125,00
Yazar Sayısı 8