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SCI-Expanded JCR Q2 Özgün Makale Scopus
First Simple Sequence Repeat-based Genetic Linkage Map Reveals a Major QTL for Leafing Time in Walnut (Juglans regia L.)
Tree Genetics & Genomes 2019 Cilt 15 Sayı 1
Scopus Eşleşmesi Bulundu
25
Atıf
15
Cilt
Scopus Yazarları: S. Kefayati, A. S. Ikhsan, Mehmet Sütyemez, A. Paizila, Şakir Burak Bükücü, H. Topcu, Salih Kafkas
Özet
Walnut (Juglans regia L.) is one of the most important nut tree species. Simple sequence repeat (SSR)-based genetic linkage maps are valuable and effective tools for studies on integrative and comparative mapping. The data available in literature on walnut is inadequate for linkage mapping. Therefore, in the present study, we aimed to construct the first SSR-based genetic linkage map using the ‘Chandler’ × ‘Kaplan-86’ F1 population and to identify QTL (Quantitative Trait Loci) for leafing time in walnut. A total of 386 SSRs were mapped to 16 linkage groups (LGs) after screening 1437 SSR primer pairs. Among the mapped markers, 166 SSRs (43.0%) were heterozygous in both the parents, whereas 113 (29.3%) and 107 (27.7%) markers were from one of the parents that were integrated into the female and male maps, respectively. The total length of the consensus map was 1568.2 cM, with an average length of 98.0 cM. It included an average of 24.1 markers per LG, and the mean distance between SSR markers was 4.3 cM. The Chandler maternal linkage map included 279 SSR markers of total map length 1285.8 cM, whereas the Kaplan-86 male genetic map contained 273 SSRs of total map length 1574.4 cM. The SSR-based linkage maps presented in this study are moderately dense and can be considered as a fundamental genetic linkage map for further genetic and molecular studies in walnut, as well as in other Juglans species. A major QTL was identified for leafing time on LG4 explaining 52.0–68.8% of the phenotypic variation at similar positions in parental and consensus maps. The identified QTL region with associate markers can be potential for marker-assisted selection in the future for walnut breeding programs.
Anahtar Kelimeler (Scopus)
Microsatellite Walnut Juglans regia Linkage mapping Simple sequence repeat

Anahtar Kelimeler

Microsatellite Walnut Juglans regia Linkage mapping Simple sequence repeat

Makale Bilgileri

Dergi Tree Genetics & Genomes
ISSN 1614-2950
Yıl 2019 / 2. ay
Cilt / Sayı 15 / 1
Sayfalar 1 – 12
Makale Türü Özgün Makale
Hakemlik Hakemli
Endeks SCI-Expanded
JCR Quartile Q2
Yayın Dili İngilizce
Kapsam Uluslararası
Toplam Yazar 7 kişi
Erişim Türü Elektronik
Erişim Linki Makaleye Git
Alan Ziraat, Orman ve Su Ürünleri Temel Alanı Bahçe Bitkileri Yetiştirme ve Islahı Meyve Yetiştirme ve Islahı

YÖKSİS Yazar Kaydı

Yazar Adı KEFAYATİ SİNA, IKHSAN ADİ SURYA, SÜTYEMEZ MEHMET, PAİZİLA AİBİBULA, TOPÇU HAYAT, BÜKÜCÜ ŞAKİR BURAK, KAFKAS SALİH
YÖKSİS ID 3764754

Metrikler

Scopus Atıf 25
JCR Quartile Q2
Yazar Sayısı 7